Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
USP6P35125 POLE2-203ENST00000553805 496 ntTSL 2 BASIC22.31■■□□□ 1.16
USP6P35125 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC22.31■■□□□ 1.16
USP6P35125 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC22.31■■□□□ 1.16
USP6P35125 AC007431.3-201ENST00000623221 587 ntBASIC22.31■■□□□ 1.16
USP6P35125 AL033527.5-202ENST00000641632 1098 ntBASIC22.31■■□□□ 1.16
USP6P35125 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6P35125 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6P35125 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC22.3■■□□□ 1.16
USP6P35125 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
USP6P35125 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
USP6P35125 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
USP6P35125 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.3■■□□□ 1.16
USP6P35125 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
USP6P35125 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.3■■□□□ 1.16
USP6P35125 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
USP6P35125 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6P35125 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6P35125 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6P35125 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6P35125 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
USP6P35125 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC22.3■■□□□ 1.16
USP6P35125 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC22.3■■□□□ 1.16
USP6P35125 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
USP6P35125 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC22.3■■□□□ 1.16
USP6P35125 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC22.3■■□□□ 1.16
USP6P35125 GIMAP3P-201ENST00000495150 836 ntBASIC22.3■■□□□ 1.16
USP6P35125 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
USP6P35125 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC22.3■■□□□ 1.16
USP6P35125 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC22.3■■□□□ 1.16
USP6P35125 AC008494.3-201ENST00000606615 944 ntBASIC22.3■■□□□ 1.16
USP6P35125 AL008721.1-201ENST00000609964 604 ntBASIC22.3■■□□□ 1.16
USP6P35125 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC22.3■■□□□ 1.16
USP6P35125 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
USP6P35125 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
USP6P35125 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6P35125 RELA-227ENST00000615805 2236 ntTSL 5 BASIC22.29■■□□□ 1.16
USP6P35125 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC22.29■■□□□ 1.16
USP6P35125 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6P35125 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6P35125 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6P35125 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6P35125 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
USP6P35125 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6P35125 AC079776.1-201ENST00000401540 1152 ntBASIC22.29■■□□□ 1.16
USP6P35125 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC22.29■■□□□ 1.16
USP6P35125 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC22.29■■□□□ 1.16
USP6P35125 INE1-201ENST00000456273 945 ntBASIC22.29■■□□□ 1.16
USP6P35125 AC055876.2-201ENST00000531834 546 ntBASIC22.29■■□□□ 1.16
USP6P35125 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC22.29■■□□□ 1.16
USP6P35125 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
USP6P35125 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC22.28■■□□□ 1.16
USP6P35125 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
USP6P35125 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC22.28■■□□□ 1.16
USP6P35125 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
USP6P35125 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC22.28■■□□□ 1.16
USP6P35125 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC22.28■■□□□ 1.16
USP6P35125 ATP5G2P4-201ENST00000442175 420 ntBASIC22.28■■□□□ 1.16
USP6P35125 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
USP6P35125 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC22.28■■□□□ 1.16
USP6P35125 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC22.28■■□□□ 1.16
USP6P35125 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
USP6P35125 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
USP6P35125 AL359881.2-201ENST00000602973 570 ntBASIC22.28■■□□□ 1.16
USP6P35125 SRD5A3P1-201ENST00000603021 949 ntBASIC22.28■■□□□ 1.16
USP6P35125 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 AC026979.3-201ENST00000607315 403 ntBASIC22.28■■□□□ 1.16
USP6P35125 5S_rRNA.22-201ENST00000614916 106 ntBASIC22.28■■□□□ 1.16
USP6P35125 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
USP6P35125 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
USP6P35125 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC22.28■■□□□ 1.16
USP6P35125 AL023806.1-201ENST00000603994 1649 ntBASIC22.28■■□□□ 1.16
USP6P35125 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC22.27■■□□□ 1.16
USP6P35125 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
USP6P35125 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP6P35125 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
USP6P35125 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
USP6P35125 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP6P35125 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
USP6P35125 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
USP6P35125 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP6P35125 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
USP6P35125 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC22.27■■□□□ 1.16
USP6P35125 AP006294.1-201ENST00000415407 339 ntBASIC22.27■■□□□ 1.16
USP6P35125 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC22.27■■□□□ 1.16
USP6P35125 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
USP6P35125 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC22.27■■□□□ 1.16
USP6P35125 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC22.27■■□□□ 1.16
USP6P35125 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms