Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC16.33■□□□□ 0.2
HOXA6P31267 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HOXA6P31267 WFDC1-204ENST00000613603 549 ntBASIC16.33■□□□□ 0.2
HOXA6P31267 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA6P31267 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXA6P31267 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA6P31267 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA6P31267 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HOXA6P31267 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXA6P31267 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXA6P31267 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HOXA6P31267 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.33■□□□□ 0.2
HOXA6P31267 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA6P31267 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA6P31267 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA6P31267 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA6P31267 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA6P31267 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HOXA6P31267 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.33■□□□□ 0.2
HOXA6P31267 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
HOXA6P31267 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXA6P31267 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HOXA6P31267 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
HOXA6P31267 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HOXA6P31267 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXA6P31267 AC245100.3-201ENST00000441281 285 ntBASIC16.32■□□□□ 0.2
HOXA6P31267 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXA6P31267 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXA6P31267 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXA6P31267 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.32■□□□□ 0.2
HOXA6P31267 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.32■□□□□ 0.2
HOXA6P31267 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HOXA6P31267 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXA6P31267 SNX33P1-201ENST00000592116 1762 ntBASIC16.32■□□□□ 0.2
HOXA6P31267 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXA6P31267 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.32■□□□□ 0.2
HOXA6P31267 MIR8072-201ENST00000614241 80 ntBASIC16.32■□□□□ 0.2
HOXA6P31267 MIR6775-201ENST00000617557 69 ntBASIC16.32■□□□□ 0.2
HOXA6P31267 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.32■□□□□ 0.2
HOXA6P31267 AL109936.8-201ENST00000641772 604 ntBASIC16.32■□□□□ 0.2
HOXA6P31267 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HOXA6P31267 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HOXA6P31267 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXA6P31267 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 LINC02012-201ENST00000608206 1725 ntBASIC16.31■□□□□ 0.2
HOXA6P31267 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HOXA6P31267 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXA6P31267 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXA6P31267 AL139010.1-201ENST00000454878 894 ntBASIC16.31■□□□□ 0.2
HOXA6P31267 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXA6P31267 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.31■□□□□ 0.2
HOXA6P31267 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXA6P31267 FAM8A2P-201ENST00000528813 1142 ntBASIC16.31■□□□□ 0.2
HOXA6P31267 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXA6P31267 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.31■□□□□ 0.2
HOXA6P31267 AC008735.3-201ENST00000596646 500 ntBASIC16.31■□□□□ 0.2
HOXA6P31267 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.31■□□□□ 0.2
HOXA6P31267 AC020765.3-201ENST00000613051 740 ntBASIC16.31■□□□□ 0.2
HOXA6P31267 AL033527.5-201ENST00000641382 801 ntBASIC16.31■□□□□ 0.2
HOXA6P31267 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HOXA6P31267 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HOXA6P31267 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HOXA6P31267 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HOXA6P31267 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms