Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
RFX1P22670 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.25■□□□□ 0.51
RFX1P22670 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX1P22670 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX1P22670 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RFX1P22670 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX1P22670 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RFX1P22670 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.25■□□□□ 0.51
RFX1P22670 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
RFX1P22670 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX1P22670 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX1P22670 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 AC006277.1-201ENST00000624348 1610 ntBASIC18.24■□□□□ 0.51
RFX1P22670 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX1P22670 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX1P22670 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 MIR770-201ENST00000390219 98 ntBASIC18.24■□□□□ 0.51
RFX1P22670 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RFX1P22670 ALG1L5P-201ENST00000482043 771 ntBASIC18.24■□□□□ 0.51
RFX1P22670 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX1P22670 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
RFX1P22670 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
RFX1P22670 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.24■□□□□ 0.51
RFX1P22670 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFX1P22670 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.24■□□□□ 0.51
RFX1P22670 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.24■□□□□ 0.51
RFX1P22670 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX1P22670 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC18.24■□□□□ 0.51
RFX1P22670 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFX1P22670 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.23■□□□□ 0.51
RFX1P22670 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RFX1P22670 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
RFX1P22670 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.23■□□□□ 0.51
RFX1P22670 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.23■□□□□ 0.51
RFX1P22670 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
RFX1P22670 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 AC006538.1-201ENST00000567905 1585 ntBASIC18.23■□□□□ 0.51
RFX1P22670 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RFX1P22670 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.23■□□□□ 0.51
RFX1P22670 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.23■□□□□ 0.51
RFX1P22670 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC18.23■□□□□ 0.51
RFX1P22670 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.23■□□□□ 0.51
RFX1P22670 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
RFX1P22670 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.23■□□□□ 0.51
RFX1P22670 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.23■□□□□ 0.51
RFX1P22670 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFX1P22670 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFX1P22670 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.22■□□□□ 0.51
RFX1P22670 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RFX1P22670 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX1P22670 OVCH1-AS1-204ENST00000641955 5529 ntBASIC18.22■□□□□ 0.51
RFX1P22670 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.22■□□□□ 0.51
RFX1P22670 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX1P22670 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.22■□□□□ 0.51
RFX1P22670 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFX1P22670 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.22■□□□□ 0.51
RFX1P22670 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.22■□□□□ 0.51
RFX1P22670 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18.22■□□□□ 0.51
RFX1P22670 CEND1P1-201ENST00000451006 455 ntBASIC18.22■□□□□ 0.51
RFX1P22670 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFX1P22670 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.22■□□□□ 0.51
RFX1P22670 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.22■□□□□ 0.51
RFX1P22670 COX5A-206ENST00000568783 571 ntTSL 3 BASIC18.22■□□□□ 0.51
RFX1P22670 AC239800.4-201ENST00000603712 296 ntBASIC18.22■□□□□ 0.51
RFX1P22670 AL078644.1-201ENST00000609881 752 ntBASIC18.22■□□□□ 0.51
RFX1P22670 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFX1P22670 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms