Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CDH3P22223 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH3P22223 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH3P22223 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH3P22223 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH3P22223 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH3P22223 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH3P22223 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.47■□□□□ 0.23
CDH3P22223 AC018845.2-201ENST00000568326 409 ntBASIC16.47■□□□□ 0.23
CDH3P22223 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH3P22223 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
CDH3P22223 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH3P22223 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CDH3P22223 AL023806.1-201ENST00000603994 1649 ntBASIC16.47■□□□□ 0.23
CDH3P22223 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH3P22223 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CDH3P22223 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH3P22223 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH3P22223 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CDH3P22223 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.47■□□□□ 0.23
CDH3P22223 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CDH3P22223 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH3P22223 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CDH3P22223 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH3P22223 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH3P22223 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH3P22223 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH3P22223 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
CDH3P22223 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CDH3P22223 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH3P22223 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CDH3P22223 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
CDH3P22223 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH3P22223 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH3P22223 PAWRP1-201ENST00000451083 565 ntBASIC16.46■□□□□ 0.23
CDH3P22223 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CDH3P22223 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH3P22223 GPALPP1-207ENST00000611650 899 ntBASIC16.46■□□□□ 0.23
CDH3P22223 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH3P22223 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CDH3P22223 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.46■□□□□ 0.23
CDH3P22223 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CDH3P22223 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.46■□□□□ 0.23
CDH3P22223 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.46■□□□□ 0.22
CDH3P22223 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
CDH3P22223 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.46■□□□□ 0.22
CDH3P22223 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDH3P22223 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH3P22223 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH3P22223 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDH3P22223 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH3P22223 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH3P22223 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CDH3P22223 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
CDH3P22223 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 MIR1233-2-201ENST00000408138 82 ntBASIC16.45■□□□□ 0.22
CDH3P22223 MIR1233-1-201ENST00000408722 82 ntBASIC16.45■□□□□ 0.22
CDH3P22223 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.45■□□□□ 0.22
CDH3P22223 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.45■□□□□ 0.22
CDH3P22223 AC087163.2-201ENST00000457299 853 ntBASIC16.45■□□□□ 0.22
CDH3P22223 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH3P22223 OR7E47P-204ENST00000575924 449 ntBASIC16.45■□□□□ 0.22
CDH3P22223 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.45■□□□□ 0.22
CDH3P22223 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH3P22223 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
CDH3P22223 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CDH3P22223 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
CDH3P22223 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CDH3P22223 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.45■□□□□ 0.22
CDH3P22223 LINC02199-201ENST00000506655 2702 ntBASIC16.45■□□□□ 0.22
CDH3P22223 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.45■□□□□ 0.22
CDH3P22223 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CDH3P22223 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH3P22223 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.45■□□□□ 0.22
CDH3P22223 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms