Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.02■□□□□ 0.48
SYN1P17600 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYN1P17600 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SYN1P17600 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SYN1P17600 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SYN1P17600 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYN1P17600 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SYN1P17600 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SYN1P17600 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.02■□□□□ 0.48
SYN1P17600 FAM21FP-201ENST00000426241 1131 ntBASIC18.02■□□□□ 0.48
SYN1P17600 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SYN1P17600 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.02■□□□□ 0.48
SYN1P17600 AC007551.1-201ENST00000457394 519 ntBASIC18.02■□□□□ 0.48
SYN1P17600 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC18.02■□□□□ 0.48
SYN1P17600 RNA5SP423-201ENST00000517127 109 ntBASIC18.02■□□□□ 0.48
SYN1P17600 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SYN1P17600 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.02■□□□□ 0.48
SYN1P17600 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.02■□□□□ 0.48
SYN1P17600 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC18.02■□□□□ 0.48
SYN1P17600 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC18.02■□□□□ 0.48
SYN1P17600 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC18.02■□□□□ 0.48
SYN1P17600 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC18.02■□□□□ 0.48
SYN1P17600 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SYN1P17600 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SYN1P17600 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SYN1P17600 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SYN1P17600 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SYN1P17600 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SYN1P17600 AC020763.4-201ENST00000623414 4170 ntBASIC18.02■□□□□ 0.47
SYN1P17600 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SYN1P17600 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.02■□□□□ 0.47
SYN1P17600 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
SYN1P17600 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC18.02■□□□□ 0.47
SYN1P17600 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.02■□□□□ 0.47
SYN1P17600 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
SYN1P17600 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
SYN1P17600 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
SYN1P17600 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
SYN1P17600 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 AC009113.1-201ENST00000570267 2443 ntBASIC18.01■□□□□ 0.47
SYN1P17600 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
SYN1P17600 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 NOC2LP1-202ENST00000452600 2235 ntBASIC18.01■□□□□ 0.47
SYN1P17600 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.01■□□□□ 0.47
SYN1P17600 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.01■□□□□ 0.47
SYN1P17600 MIR1247-201ENST00000408206 136 ntBASIC18.01■□□□□ 0.47
SYN1P17600 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.01■□□□□ 0.47
SYN1P17600 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.01■□□□□ 0.47
SYN1P17600 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC18.01■□□□□ 0.47
SYN1P17600 RNA5SP412-201ENST00000516234 123 ntBASIC18.01■□□□□ 0.47
SYN1P17600 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.01■□□□□ 0.47
SYN1P17600 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.01■□□□□ 0.47
SYN1P17600 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.01■□□□□ 0.47
SYN1P17600 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.01■□□□□ 0.47
SYN1P17600 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.01■□□□□ 0.47
SYN1P17600 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.01■□□□□ 0.47
SYN1P17600 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
SYN1P17600 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.01■□□□□ 0.47
SYN1P17600 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.01■□□□□ 0.47
SYN1P17600 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SYN1P17600 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 AC006538.1-201ENST00000567905 1585 ntBASIC18■□□□□ 0.47
SYN1P17600 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18■□□□□ 0.47
SYN1P17600 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC18■□□□□ 0.47
SYN1P17600 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC18■□□□□ 0.47
SYN1P17600 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18■□□□□ 0.47
SYN1P17600 GPAA1P2-201ENST00000417923 928 ntBASIC18■□□□□ 0.47
SYN1P17600 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18■□□□□ 0.47
SYN1P17600 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18■□□□□ 0.47
SYN1P17600 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18■□□□□ 0.47
SYN1P17600 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC18■□□□□ 0.47
SYN1P17600 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18■□□□□ 0.47
SYN1P17600 PFN1P12-201ENST00000455938 534 ntBASIC18■□□□□ 0.47
SYN1P17600 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18■□□□□ 0.47
SYN1P17600 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC18■□□□□ 0.47
SYN1P17600 ZNF767P-206ENST00000513792 565 ntBASIC18■□□□□ 0.47
SYN1P17600 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
SYN1P17600 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC18■□□□□ 0.47
SYN1P17600 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18■□□□□ 0.47
SYN1P17600 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC18■□□□□ 0.47
SYN1P17600 KRT8P12-202ENST00000472924 1397 ntBASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms