Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A2P16615 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2A2P16615 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP2A2P16615 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP2A2P16615 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP2A2P16615 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2A2P16615 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP2A2P16615 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.52■□□□□ 0.56
ATP2A2P16615 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.52■□□□□ 0.56
ATP2A2P16615 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.52■□□□□ 0.56
ATP2A2P16615 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.52■□□□□ 0.56
ATP2A2P16615 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATP2A2P16615 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.52■□□□□ 0.56
ATP2A2P16615 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATP2A2P16615 AL135999.2-201ENST00000622438 1686 ntBASIC18.52■□□□□ 0.56
ATP2A2P16615 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A2P16615 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A2P16615 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A2P16615 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A2P16615 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.52■□□□□ 0.56
ATP2A2P16615 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ATP2A2P16615 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ATP2A2P16615 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2A2P16615 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2A2P16615 AC012317.2-201ENST00000623305 2251 ntBASIC18.52■□□□□ 0.55
ATP2A2P16615 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
ATP2A2P16615 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
ATP2A2P16615 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP2A2P16615 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
ATP2A2P16615 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATP2A2P16615 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP2A2P16615 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
ATP2A2P16615 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A2P16615 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
ATP2A2P16615 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 OR8S1-201ENST00000310194 1080 ntBASIC18.51■□□□□ 0.55
ATP2A2P16615 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
ATP2A2P16615 SPDYE14P-201ENST00000442619 822 ntBASIC18.51■□□□□ 0.55
ATP2A2P16615 MEIS3P1-201ENST00000495167 958 ntBASIC18.51■□□□□ 0.55
ATP2A2P16615 AC069120.2-201ENST00000524091 540 ntBASIC18.51■□□□□ 0.55
ATP2A2P16615 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP2A2P16615 CR383656.12-201ENST00000549567 513 ntBASIC18.51■□□□□ 0.55
ATP2A2P16615 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP2A2P16615 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP2A2P16615 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP2A2P16615 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A2P16615 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ATP2A2P16615 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ATP2A2P16615 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.51■□□□□ 0.55
ATP2A2P16615 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP2A2P16615 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP2A2P16615 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A2P16615 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A2P16615 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ATP2A2P16615 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP2A2P16615 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A2P16615 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP2A2P16615 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP2A2P16615 AC107918.2-201ENST00000530817 355 ntBASIC18.5■□□□□ 0.55
ATP2A2P16615 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 KRT8P23-201ENST00000560090 1207 ntBASIC18.5■□□□□ 0.55
ATP2A2P16615 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
ATP2A2P16615 MIR4515-201ENST00000584082 81 ntBASIC18.5■□□□□ 0.55
ATP2A2P16615 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
ATP2A2P16615 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP2A2P16615 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ATP2A2P16615 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms