Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PPP3CBP16298 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
PPP3CBP16298 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PPP3CBP16298 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
PPP3CBP16298 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PPP3CBP16298 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP3CBP16298 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP3CBP16298 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP3CBP16298 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.09■□□□□ 0.01
PPP3CBP16298 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
PPP3CBP16298 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP3CBP16298 MCCD1P2-201ENST00000423228 335 ntBASIC15.09■□□□□ 0.01
PPP3CBP16298 HCG4B-203ENST00000450128 991 ntBASIC15.09■□□□□ 0.01
PPP3CBP16298 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP3CBP16298 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.09■□□□□ 0.01
PPP3CBP16298 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP3CBP16298 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.09■□□□□ 0.01
PPP3CBP16298 AC004790.2-201ENST00000623588 572 ntBASIC15.09■□□□□ 0.01
PPP3CBP16298 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PPP3CBP16298 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.09■□□□□ 0.01
PPP3CBP16298 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP3CBP16298 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP3CBP16298 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP3CBP16298 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
PPP3CBP16298 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PPP3CBP16298 LINC00554-201ENST00000564841 3011 ntBASIC15.09■□□□□ 0.01
PPP3CBP16298 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PPP3CBP16298 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
PPP3CBP16298 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0.01
PPP3CBP16298 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.08■□□□□ 0.01
PPP3CBP16298 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PPP3CBP16298 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.08■□□□□ 0.01
PPP3CBP16298 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PPP3CBP16298 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
PPP3CBP16298 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
PPP3CBP16298 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.08■□□□□ 0
PPP3CBP16298 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.08■□□□□ 0
PPP3CBP16298 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.08■□□□□ 0
PPP3CBP16298 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.08■□□□□ 0
PPP3CBP16298 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.08■□□□□ 0
PPP3CBP16298 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PPP3CBP16298 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.08■□□□□ 0
PPP3CBP16298 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.08■□□□□ 0
PPP3CBP16298 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.08■□□□□ 0
PPP3CBP16298 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
PPP3CBP16298 AC010327.4-202ENST00000591484 748 ntBASIC15.08■□□□□ 0
PPP3CBP16298 AL139327.4-201ENST00000612362 153 ntBASIC15.08■□□□□ 0
PPP3CBP16298 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.08■□□□□ 0
PPP3CBP16298 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.08■□□□□ 0
PPP3CBP16298 AC133963.1-201ENST00000504166 1679 ntBASIC15.08■□□□□ 0
PPP3CBP16298 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
PPP3CBP16298 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
PPP3CBP16298 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.08■□□□□ 0
PPP3CBP16298 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
PPP3CBP16298 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.07■□□□□ 0
PPP3CBP16298 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.07■□□□□ 0
PPP3CBP16298 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PPP3CBP16298 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.07■□□□□ 0
PPP3CBP16298 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
PPP3CBP16298 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.07■□□□□ 0
PPP3CBP16298 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.07■□□□□ 0
PPP3CBP16298 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PPP3CBP16298 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC15.07■□□□□ 0
PPP3CBP16298 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
PPP3CBP16298 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
PPP3CBP16298 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
PPP3CBP16298 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
PPP3CBP16298 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
PPP3CBP16298 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms