Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 FAM220BP-201ENST00000377689 816 ntBASIC15.7■□□□□ 0.1
CCL4P13236 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.7■□□□□ 0.1
CCL4P13236 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL4P13236 RPL37AP1-201ENST00000412502 279 ntBASIC15.7■□□□□ 0.1
CCL4P13236 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL4P13236 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.7■□□□□ 0.1
CCL4P13236 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.7■□□□□ 0.1
CCL4P13236 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL4P13236 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL4P13236 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL4P13236 AC027307.3-201ENST00000594262 1100 ntBASIC15.7■□□□□ 0.1
CCL4P13236 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL4P13236 RN7SL828P-201ENST00000607615 303 ntBASIC15.7■□□□□ 0.1
CCL4P13236 AL589739.1-201ENST00000607720 493 ntBASIC15.7■□□□□ 0.1
CCL4P13236 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL4P13236 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL4P13236 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL4P13236 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CCL4P13236 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.7■□□□□ 0.1
CCL4P13236 AC068880.1-201ENST00000507289 2297 ntBASIC15.7■□□□□ 0.1
CCL4P13236 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL4P13236 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.7■□□□□ 0.1
CCL4P13236 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.7■□□□□ 0.1
CCL4P13236 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.7■□□□□ 0.1
CCL4P13236 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCL4P13236 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCL4P13236 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCL4P13236 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 SPTLC1P1-201ENST00000447199 261 ntBASIC15.69■□□□□ 0.1
CCL4P13236 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.69■□□□□ 0.1
CCL4P13236 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL4P13236 AC098859.1-201ENST00000502915 1238 ntBASIC15.69■□□□□ 0.1
CCL4P13236 RNA5SP410-201ENST00000516285 106 ntBASIC15.69■□□□□ 0.1
CCL4P13236 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.69■□□□□ 0.1
CCL4P13236 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL4P13236 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL4P13236 AC009407.1-201ENST00000568958 598 ntBASIC15.69■□□□□ 0.1
CCL4P13236 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.69■□□□□ 0.1
CCL4P13236 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL4P13236 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.69■□□□□ 0.1
CCL4P13236 TEX28P1-201ENST00000613479 1221 ntBASIC15.69■□□□□ 0.1
CCL4P13236 TEX28P2-201ENST00000617764 1221 ntBASIC15.69■□□□□ 0.1
CCL4P13236 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCL4P13236 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL4P13236 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL4P13236 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.69■□□□□ 0.1
CCL4P13236 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL4P13236 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CCL4P13236 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 CETN4P-206ENST00000642099 2168 ntBASIC15.69■□□□□ 0.1
CCL4P13236 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.69■□□□□ 0.1
CCL4P13236 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CCL4P13236 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCL4P13236 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL4P13236 KRT8P39-201ENST00000396270 1433 ntBASIC15.68■□□□□ 0.1
CCL4P13236 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL4P13236 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL4P13236 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCL4P13236 NOC2LP2-201ENST00000407594 1944 ntBASIC15.68■□□□□ 0.1
CCL4P13236 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL4P13236 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL4P13236 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL4P13236 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL4P13236 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL4P13236 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL4P13236 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL4P13236 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CCL4P13236 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL4P13236 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CCL4P13236 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.68■□□□□ 0.1
CCL4P13236 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.68■□□□□ 0.1
CCL4P13236 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CCL4P13236 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CCL4P13236 AC009477.1-201ENST00000452936 217 ntBASIC15.68■□□□□ 0.1
CCL4P13236 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.68■□□□□ 0.1
CCL4P13236 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.68■□□□□ 0.1
CCL4P13236 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.68■□□□□ 0.1
CCL4P13236 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms