Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.87■□□□□ 0.29
RETP07949 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 MRPS18AP1-201ENST00000414458 589 ntBASIC16.87■□□□□ 0.29
RETP07949 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.87■□□□□ 0.29
RETP07949 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.87■□□□□ 0.29
RETP07949 ALG1L8P-201ENST00000533887 760 ntBASIC16.87■□□□□ 0.29
RETP07949 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.87■□□□□ 0.29
RETP07949 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.87■□□□□ 0.29
RETP07949 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.87■□□□□ 0.29
RETP07949 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.87■□□□□ 0.29
RETP07949 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.87■□□□□ 0.29
RETP07949 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.87■□□□□ 0.29
RETP07949 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RETP07949 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC16.87■□□□□ 0.29
RETP07949 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RETP07949 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.87■□□□□ 0.29
RETP07949 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
RETP07949 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
RETP07949 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RETP07949 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.86■□□□□ 0.29
RETP07949 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.86■□□□□ 0.29
RETP07949 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.86■□□□□ 0.29
RETP07949 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
RETP07949 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
RETP07949 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.86■□□□□ 0.29
RETP07949 IGHV3-71-201ENST00000523324 359 ntBASIC16.86■□□□□ 0.29
RETP07949 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
RETP07949 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
RETP07949 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.86■□□□□ 0.29
RETP07949 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.86■□□□□ 0.29
RETP07949 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
RETP07949 AC011676.5-201ENST00000624864 2660 ntBASIC16.86■□□□□ 0.29
RETP07949 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 LINC00304-203ENST00000565008 1864 ntBASIC16.86■□□□□ 0.29
RETP07949 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
RETP07949 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RETP07949 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RETP07949 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RETP07949 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RETP07949 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.85■□□□□ 0.29
RETP07949 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RETP07949 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 AC009949.1-201ENST00000623048 1830 ntBASIC16.85■□□□□ 0.29
RETP07949 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.85■□□□□ 0.29
RETP07949 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.85■□□□□ 0.29
RETP07949 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.85■□□□□ 0.29
RETP07949 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.85■□□□□ 0.29
RETP07949 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.85■□□□□ 0.29
RETP07949 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.85■□□□□ 0.29
RETP07949 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.85■□□□□ 0.29
RETP07949 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.85■□□□□ 0.29
RETP07949 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RETP07949 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
RETP07949 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.85■□□□□ 0.29
RETP07949 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RETP07949 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
RETP07949 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RETP07949 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms