Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 SPDYE11-202ENST00000450699 704 ntBASIC15.71■□□□□ 0.11
PDGFAP04085 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFAP04085 AC079140.1-201ENST00000508039 487 ntBASIC15.71■□□□□ 0.11
PDGFAP04085 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.71■□□□□ 0.11
PDGFAP04085 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.71■□□□□ 0.11
PDGFAP04085 SPDYE9P-201ENST00000570642 692 ntBASIC15.71■□□□□ 0.11
PDGFAP04085 SPDYE10P-202ENST00000612005 668 ntBASIC15.71■□□□□ 0.11
PDGFAP04085 SPDYE8P-202ENST00000612377 668 ntBASIC15.71■□□□□ 0.11
PDGFAP04085 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFAP04085 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFAP04085 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.71■□□□□ 0.11
PDGFAP04085 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.71■□□□□ 0.11
PDGFAP04085 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PDGFAP04085 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.71■□□□□ 0.1
PDGFAP04085 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDGFAP04085 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
PDGFAP04085 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDGFAP04085 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDGFAP04085 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.1
PDGFAP04085 AC046185.3-201ENST00000623228 1824 ntBASIC15.71■□□□□ 0.1
PDGFAP04085 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PDGFAP04085 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFAP04085 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFAP04085 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PDGFAP04085 HR-201ENST00000312841 5351 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFAP04085 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFAP04085 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
PDGFAP04085 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
PDGFAP04085 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFAP04085 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFAP04085 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PDGFAP04085 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFAP04085 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.7■□□□□ 0.1
PDGFAP04085 PMS2P4-201ENST00000412466 1052 ntBASIC15.7■□□□□ 0.1
PDGFAP04085 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFAP04085 AC140658.5-201ENST00000438532 169 ntBASIC15.7■□□□□ 0.1
PDGFAP04085 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.7■□□□□ 0.1
PDGFAP04085 AL592309.1-201ENST00000443127 649 ntBASIC15.7■□□□□ 0.1
PDGFAP04085 AC067863.1-201ENST00000494933 530 ntBASIC15.7■□□□□ 0.1
PDGFAP04085 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PDGFAP04085 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFAP04085 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 AF228730.6-201ENST00000641497 218 ntBASIC15.7■□□□□ 0.1
PDGFAP04085 AC084121.3-201ENST00000641716 218 ntBASIC15.7■□□□□ 0.1
PDGFAP04085 AC105233.6-201ENST00000642093 218 ntBASIC15.7■□□□□ 0.1
PDGFAP04085 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PDGFAP04085 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
PDGFAP04085 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFAP04085 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.7■□□□□ 0.1
PDGFAP04085 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFAP04085 FER1L4-210ENST00000615531 5998 ntBASIC15.7■□□□□ 0.1
PDGFAP04085 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDGFAP04085 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.7■□□□□ 0.1
PDGFAP04085 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.7■□□□□ 0.1
PDGFAP04085 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFAP04085 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.7■□□□□ 0.1
PDGFAP04085 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PDGFAP04085 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PDGFAP04085 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.69■□□□□ 0.1
PDGFAP04085 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.69■□□□□ 0.1
PDGFAP04085 MIR661-201ENST00000384842 89 ntBASIC15.69■□□□□ 0.1
PDGFAP04085 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDGFAP04085 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms