Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.27■□□□□ 0.52
VTNP04004 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC18.27■□□□□ 0.52
VTNP04004 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.27■□□□□ 0.52
VTNP04004 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.27■□□□□ 0.52
VTNP04004 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.27■□□□□ 0.52
VTNP04004 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.27■□□□□ 0.52
VTNP04004 PRYP6-201ENST00000514804 343 ntBASIC18.27■□□□□ 0.52
VTNP04004 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC18.27■□□□□ 0.52
VTNP04004 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.27■□□□□ 0.52
VTNP04004 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.27■□□□□ 0.52
VTNP04004 MIR4453-201ENST00000584019 89 ntBASIC18.27■□□□□ 0.52
VTNP04004 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.27■□□□□ 0.52
VTNP04004 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.27■□□□□ 0.52
VTNP04004 AC073389.1-201ENST00000595595 795 ntBASIC18.27■□□□□ 0.52
VTNP04004 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
VTNP04004 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VTNP04004 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.27■□□□□ 0.52
VTNP04004 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.27■□□□□ 0.52
VTNP04004 FOXO1B-201ENST00000504678 1527 ntBASIC18.27■□□□□ 0.51
VTNP04004 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
VTNP04004 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.27■□□□□ 0.51
VTNP04004 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VTNP04004 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
VTNP04004 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
VTNP04004 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.26■□□□□ 0.51
VTNP04004 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
VTNP04004 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.26■□□□□ 0.51
VTNP04004 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.26■□□□□ 0.51
VTNP04004 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.26■□□□□ 0.51
VTNP04004 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.26■□□□□ 0.51
VTNP04004 AC140878.1-201ENST00000565277 250 ntBASIC18.26■□□□□ 0.51
VTNP04004 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.26■□□□□ 0.51
VTNP04004 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.26■□□□□ 0.51
VTNP04004 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VTNP04004 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
VTNP04004 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
VTNP04004 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
VTNP04004 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 AC012313.1-201ENST00000593393 3059 ntBASIC18.26■□□□□ 0.51
VTNP04004 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VTNP04004 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.25■□□□□ 0.51
VTNP04004 AP3S2-216ENST00000617003 1561 ntBASIC18.25■□□□□ 0.51
VTNP04004 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.25■□□□□ 0.51
VTNP04004 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.25■□□□□ 0.51
VTNP04004 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VTNP04004 AC073439.1-201ENST00000624121 1774 ntBASIC18.25■□□□□ 0.51
VTNP04004 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 CALY-203ENST00000368558 825 ntTSL 5 BASIC18.25■□□□□ 0.51
VTNP04004 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.25■□□□□ 0.51
VTNP04004 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.25■□□□□ 0.51
VTNP04004 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.25■□□□□ 0.51
VTNP04004 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.25■□□□□ 0.51
VTNP04004 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.25■□□□□ 0.51
VTNP04004 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.25■□□□□ 0.51
VTNP04004 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.25■□□□□ 0.51
VTNP04004 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
VTNP04004 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
VTNP04004 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC18.25■□□□□ 0.51
VTNP04004 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTNP04004 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
VTNP04004 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTNP04004 AP001094.4-201ENST00000579008 2176 ntBASIC18.24■□□□□ 0.51
VTNP04004 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.24■□□□□ 0.51
VTNP04004 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.24■□□□□ 0.51
VTNP04004 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VTNP04004 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTNP04004 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTNP04004 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.24■□□□□ 0.51
VTNP04004 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
VTNP04004 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.24■□□□□ 0.51
VTNP04004 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms