Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV12-3P01733 HLA-A-202ENST00000376806 1854 ntBASIC12.95□□□□□ -0.34
TRBV12-3P01733 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV12-3P01733 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV12-3P01733 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV12-3P01733 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV12-3P01733 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12.95□□□□□ -0.34
TRBV12-3P01733 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV12-3P01733 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 AC084018.2-201ENST00000613093 2607 ntBASIC12.94□□□□□ -0.34
TRBV12-3P01733 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV12-3P01733 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRBV12-3P01733 PCDHA14-201ENST00000506751 2298 ntBASIC12.93□□□□□ -0.34
TRBV12-3P01733 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.93□□□□□ -0.34
TRBV12-3P01733 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 PDPK2P-202ENST00000562415 1191 ntBASIC12.93□□□□□ -0.34
TRBV12-3P01733 AL031432.2-201ENST00000566714 459 ntBASIC12.93□□□□□ -0.34
TRBV12-3P01733 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 AL928711.1-201ENST00000570165 459 ntBASIC12.93□□□□□ -0.34
TRBV12-3P01733 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 AP001350.2-201ENST00000625104 1094 ntBASIC12.93□□□□□ -0.34
TRBV12-3P01733 AL645728.2-201ENST00000641974 660 ntBASIC12.93□□□□□ -0.34
TRBV12-3P01733 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV12-3P01733 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRBV12-3P01733 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
TRBV12-3P01733 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
TRBV12-3P01733 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms