Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
PDGFBP01127 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.63■□□□□ 0.25
PDGFBP01127 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.63■□□□□ 0.25
PDGFBP01127 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PDGFBP01127 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PDGFBP01127 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDGFBP01127 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.63■□□□□ 0.25
PDGFBP01127 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.62■□□□□ 0.25
PDGFBP01127 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 AC138028.4-201ENST00000564984 1845 ntBASIC16.62■□□□□ 0.25
PDGFBP01127 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFBP01127 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.62■□□□□ 0.25
PDGFBP01127 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.62■□□□□ 0.25
PDGFBP01127 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDGFBP01127 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFBP01127 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.62■□□□□ 0.25
PDGFBP01127 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFBP01127 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.62■□□□□ 0.25
PDGFBP01127 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.62■□□□□ 0.25
PDGFBP01127 RN7SL190P-201ENST00000582519 257 ntBASIC16.62■□□□□ 0.25
PDGFBP01127 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.62■□□□□ 0.25
PDGFBP01127 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.62■□□□□ 0.25
PDGFBP01127 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFBP01127 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFBP01127 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.62■□□□□ 0.25
PDGFBP01127 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDGFBP01127 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
PDGFBP01127 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
PDGFBP01127 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFBP01127 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFBP01127 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PDGFBP01127 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFBP01127 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFBP01127 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFBP01127 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PDGFBP01127 GPAA1P2-201ENST00000417923 928 ntBASIC16.61■□□□□ 0.25
PDGFBP01127 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFBP01127 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFBP01127 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFBP01127 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFBP01127 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.61■□□□□ 0.25
PDGFBP01127 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.61■□□□□ 0.25
PDGFBP01127 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFBP01127 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.61■□□□□ 0.25
PDGFBP01127 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDGFBP01127 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
PDGFBP01127 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.61■□□□□ 0.25
PDGFBP01127 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFBP01127 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFBP01127 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFBP01127 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFBP01127 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.6■□□□□ 0.25
PDGFBP01127 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFBP01127 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFBP01127 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PDGFBP01127 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PDGFBP01127 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.6■□□□□ 0.25
PDGFBP01127 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.6■□□□□ 0.25
PDGFBP01127 FAM21FP-201ENST00000426241 1131 ntBASIC16.6■□□□□ 0.25
PDGFBP01127 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.6■□□□□ 0.25
PDGFBP01127 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.6■□□□□ 0.25
PDGFBP01127 RRP7BP-205ENST00000566851 833 ntBASIC16.6■□□□□ 0.25
PDGFBP01127 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.6■□□□□ 0.25
PDGFBP01127 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.6■□□□□ 0.25
PDGFBP01127 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms