Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
MBD3O95983 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.24■□□□□ 0.67
MBD3O95983 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
MBD3O95983 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 SIGLEC30P-201ENST00000455569 941 ntBASIC19.24■□□□□ 0.67
MBD3O95983 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.24■□□□□ 0.67
MBD3O95983 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 AC073347.1-201ENST00000421633 2643 ntBASIC19.24■□□□□ 0.67
MBD3O95983 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MBD3O95983 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 AC097637.2-201ENST00000624096 1997 ntBASIC19.24■□□□□ 0.67
MBD3O95983 AL671710.1-201ENST00000610245 2349 ntBASIC19.24■□□□□ 0.67
MBD3O95983 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MBD3O95983 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3O95983 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC19.23■□□□□ 0.67
MBD3O95983 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 F11R-206ENST00000621309 4770 ntTSL 5 BASIC19.23■□□□□ 0.67
MBD3O95983 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.23■□□□□ 0.67
MBD3O95983 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.23■□□□□ 0.67
MBD3O95983 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC19.23■□□□□ 0.67
MBD3O95983 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.23■□□□□ 0.67
MBD3O95983 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
MBD3O95983 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.23■□□□□ 0.67
MBD3O95983 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.23■□□□□ 0.67
MBD3O95983 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.23■□□□□ 0.67
MBD3O95983 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.23■□□□□ 0.67
MBD3O95983 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
MBD3O95983 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.23■□□□□ 0.67
MBD3O95983 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.23■□□□□ 0.67
MBD3O95983 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3O95983 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
MBD3O95983 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD3O95983 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
MBD3O95983 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
MBD3O95983 SLC9A7P1-201ENST00000554295 3311 ntBASIC19.22■□□□□ 0.67
MBD3O95983 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
MBD3O95983 AC006058.4-201ENST00000624016 1670 ntBASIC19.22■□□□□ 0.67
MBD3O95983 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 AC246785.2-201ENST00000432512 513 ntBASIC19.22■□□□□ 0.67
MBD3O95983 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.22■□□□□ 0.67
MBD3O95983 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.22■□□□□ 0.67
MBD3O95983 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.22■□□□□ 0.67
MBD3O95983 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
MBD3O95983 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD3O95983 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD3O95983 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3O95983 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms