Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CLSTN1O94985 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.62■□□□□ 0.57
CLSTN1O94985 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLSTN1O94985 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.62■□□□□ 0.57
CLSTN1O94985 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CLSTN1O94985 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CLSTN1O94985 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
CLSTN1O94985 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC18.62■□□□□ 0.57
CLSTN1O94985 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CLSTN1O94985 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC18.61■□□□□ 0.57
CLSTN1O94985 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18.61■□□□□ 0.57
CLSTN1O94985 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLSTN1O94985 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLSTN1O94985 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLSTN1O94985 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLSTN1O94985 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.61■□□□□ 0.57
CLSTN1O94985 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLSTN1O94985 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.61■□□□□ 0.57
CLSTN1O94985 AC093909.1-201ENST00000504731 1122 ntBASIC18.61■□□□□ 0.57
CLSTN1O94985 AP002469.2-201ENST00000531724 424 ntBASIC18.61■□□□□ 0.57
CLSTN1O94985 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.61■□□□□ 0.57
CLSTN1O94985 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.61■□□□□ 0.57
CLSTN1O94985 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.61■□□□□ 0.57
CLSTN1O94985 AL773604.1-201ENST00000617417 272 ntBASIC18.61■□□□□ 0.57
CLSTN1O94985 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.61■□□□□ 0.57
CLSTN1O94985 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.61■□□□□ 0.57
CLSTN1O94985 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.61■□□□□ 0.57
CLSTN1O94985 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLSTN1O94985 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.6■□□□□ 0.57
CLSTN1O94985 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CLSTN1O94985 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
CLSTN1O94985 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.6■□□□□ 0.57
CLSTN1O94985 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.6■□□□□ 0.57
CLSTN1O94985 AC018695.7-201ENST00000624587 2492 ntBASIC18.6■□□□□ 0.57
CLSTN1O94985 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
CLSTN1O94985 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 RPS2P28-201ENST00000314255 741 ntBASIC18.6■□□□□ 0.57
CLSTN1O94985 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.6■□□□□ 0.57
CLSTN1O94985 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.6■□□□□ 0.57
CLSTN1O94985 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.6■□□□□ 0.57
CLSTN1O94985 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.6■□□□□ 0.57
CLSTN1O94985 AL160237.2-201ENST00000556165 472 ntBASIC18.6■□□□□ 0.57
CLSTN1O94985 AC025062.2-201ENST00000605477 670 ntBASIC18.6■□□□□ 0.57
CLSTN1O94985 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.6■□□□□ 0.57
CLSTN1O94985 MIR1199-201ENST00000621445 119 ntBASIC18.6■□□□□ 0.57
CLSTN1O94985 AC073592.4-201ENST00000623827 446 ntBASIC18.6■□□□□ 0.57
CLSTN1O94985 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLSTN1O94985 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.6■□□□□ 0.57
CLSTN1O94985 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CLSTN1O94985 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.6■□□□□ 0.57
CLSTN1O94985 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.6■□□□□ 0.57
CLSTN1O94985 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CLSTN1O94985 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC18.6■□□□□ 0.57
CLSTN1O94985 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.59■□□□□ 0.57
CLSTN1O94985 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.59■□□□□ 0.57
CLSTN1O94985 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLSTN1O94985 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CLSTN1O94985 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CLSTN1O94985 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLSTN1O94985 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC18.59■□□□□ 0.57
CLSTN1O94985 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLSTN1O94985 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.59■□□□□ 0.57
CLSTN1O94985 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLSTN1O94985 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLSTN1O94985 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLSTN1O94985 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLSTN1O94985 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.59■□□□□ 0.57
CLSTN1O94985 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CLSTN1O94985 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CLSTN1O94985 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.59■□□□□ 0.57
CLSTN1O94985 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CLSTN1O94985 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms