Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SMARCA5O60264 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
SMARCA5O60264 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
SMARCA5O60264 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SMARCA5O60264 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SMARCA5O60264 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC20.64■□□□□ 0.89
SMARCA5O60264 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SMARCA5O60264 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCA5O60264 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SMARCA5O60264 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC20.63■□□□□ 0.89
SMARCA5O60264 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCA5O60264 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.63■□□□□ 0.89
SMARCA5O60264 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SMARCA5O60264 AC025580.3-201ENST00000617932 1424 ntBASIC20.63■□□□□ 0.89
SMARCA5O60264 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC20.63■□□□□ 0.89
SMARCA5O60264 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SMARCA5O60264 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 ZNF259P1-201ENST00000407656 1365 ntBASIC20.63■□□□□ 0.89
SMARCA5O60264 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCA5O60264 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.63■□□□□ 0.89
SMARCA5O60264 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 AL022342.1-201ENST00000400363 863 ntBASIC20.63■□□□□ 0.89
SMARCA5O60264 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.63■□□□□ 0.89
SMARCA5O60264 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.63■□□□□ 0.89
SMARCA5O60264 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
SMARCA5O60264 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 HLA-J-202ENST00000469281 1241 ntBASIC20.63■□□□□ 0.89
SMARCA5O60264 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SMARCA5O60264 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC20.63■□□□□ 0.89
SMARCA5O60264 AL671883.3-201ENST00000603274 991 ntBASIC20.63■□□□□ 0.89
SMARCA5O60264 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.63■□□□□ 0.89
SMARCA5O60264 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.63■□□□□ 0.89
SMARCA5O60264 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.63■□□□□ 0.89
SMARCA5O60264 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SMARCA5O60264 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
SMARCA5O60264 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.62■□□□□ 0.89
SMARCA5O60264 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SMARCA5O60264 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCA5O60264 BCAR1-209ENST00000546196 1340 ntBASIC20.62■□□□□ 0.89
SMARCA5O60264 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 HCG4-201ENST00000418983 998 ntBASIC20.62■□□□□ 0.89
SMARCA5O60264 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.62■□□□□ 0.89
SMARCA5O60264 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.62■□□□□ 0.89
SMARCA5O60264 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.62■□□□□ 0.89
SMARCA5O60264 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.62■□□□□ 0.89
SMARCA5O60264 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC20.62■□□□□ 0.89
SMARCA5O60264 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.62■□□□□ 0.89
SMARCA5O60264 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCA5O60264 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.62■□□□□ 0.89
SMARCA5O60264 AC092919.2-201ENST00000623631 1645 ntBASIC20.62■□□□□ 0.89
SMARCA5O60264 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCA5O60264 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SMARCA5O60264 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SMARCA5O60264 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCA5O60264 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC20.62■□□□□ 0.89
SMARCA5O60264 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SMARCA5O60264 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SMARCA5O60264 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SMARCA5O60264 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms