Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.94■□□□□ 0.3
KDELR3O43731 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.94■□□□□ 0.3
KDELR3O43731 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
KDELR3O43731 AC139530.3-201ENST00000620344 690 ntBASIC16.94■□□□□ 0.3
KDELR3O43731 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.94■□□□□ 0.3
KDELR3O43731 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
KDELR3O43731 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.94■□□□□ 0.3
KDELR3O43731 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
KDELR3O43731 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.94■□□□□ 0.3
KDELR3O43731 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.94■□□□□ 0.3
KDELR3O43731 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
KDELR3O43731 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
KDELR3O43731 NKILA-202ENST00000614771 2598 ntBASIC16.93■□□□□ 0.3
KDELR3O43731 GGT4P-201ENST00000623672 1708 ntBASIC16.93■□□□□ 0.3
KDELR3O43731 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 GPAA1P2-202ENST00000606848 1787 ntBASIC16.93■□□□□ 0.3
KDELR3O43731 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.93■□□□□ 0.3
KDELR3O43731 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.93■□□□□ 0.3
KDELR3O43731 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
KDELR3O43731 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 KRT18P34-201ENST00000488218 1270 ntBASIC16.93■□□□□ 0.3
KDELR3O43731 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.93■□□□□ 0.3
KDELR3O43731 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
KDELR3O43731 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.93■□□□□ 0.3
KDELR3O43731 AL135744.1-201ENST00000565098 629 ntBASIC16.93■□□□□ 0.3
KDELR3O43731 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 AC006538.3-201ENST00000612495 578 ntBASIC16.93■□□□□ 0.3
KDELR3O43731 AC105339.1-204ENST00000636249 355 ntBASIC16.93■□□□□ 0.3
KDELR3O43731 AC134684.3-201ENST00000641758 218 ntBASIC16.93■□□□□ 0.3
KDELR3O43731 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.93■□□□□ 0.3
KDELR3O43731 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.93■□□□□ 0.3
KDELR3O43731 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.93■□□□□ 0.3
KDELR3O43731 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.93■□□□□ 0.3
KDELR3O43731 AC011676.5-201ENST00000624864 2660 ntBASIC16.93■□□□□ 0.3
KDELR3O43731 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
KDELR3O43731 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KDELR3O43731 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.92■□□□□ 0.3
KDELR3O43731 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 SPDYE11-202ENST00000450699 704 ntBASIC16.92■□□□□ 0.3
KDELR3O43731 AC004967.1-201ENST00000453589 447 ntBASIC16.92■□□□□ 0.3
KDELR3O43731 KRT8P48-201ENST00000515599 1220 ntBASIC16.92■□□□□ 0.3
KDELR3O43731 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.92■□□□□ 0.3
KDELR3O43731 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.92■□□□□ 0.3
KDELR3O43731 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.92■□□□□ 0.3
KDELR3O43731 SPDYE9P-201ENST00000570642 692 ntBASIC16.92■□□□□ 0.3
KDELR3O43731 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.92■□□□□ 0.3
KDELR3O43731 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.92■□□□□ 0.3
KDELR3O43731 SPDYE10P-202ENST00000612005 668 ntBASIC16.92■□□□□ 0.3
KDELR3O43731 SPDYE8P-202ENST00000612377 668 ntBASIC16.92■□□□□ 0.3
KDELR3O43731 AC020765.3-201ENST00000613051 740 ntBASIC16.92■□□□□ 0.3
KDELR3O43731 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
KDELR3O43731 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
KDELR3O43731 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms