Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNRC18O15417 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.79■□□□□ 0.44
TNRC18O15417 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNRC18O15417 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNRC18O15417 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNRC18O15417 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNRC18O15417 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.79■□□□□ 0.44
TNRC18O15417 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.79■□□□□ 0.44
TNRC18O15417 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNRC18O15417 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNRC18O15417 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
TNRC18O15417 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TNRC18O15417 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNRC18O15417 AC005252.2-201ENST00000624630 1141 ntBASIC17.79■□□□□ 0.44
TNRC18O15417 AFG3L1P-217ENST00000557444 2447 ntBASIC17.79■□□□□ 0.44
TNRC18O15417 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TNRC18O15417 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.78■□□□□ 0.44
TNRC18O15417 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC18O15417 MSRA-203ENST00000441698 788 ntTSL 2 BASIC17.78■□□□□ 0.44
TNRC18O15417 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.78■□□□□ 0.44
TNRC18O15417 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC17.78■□□□□ 0.44
TNRC18O15417 AC127024.7-201ENST00000625101 200 ntBASIC17.78■□□□□ 0.44
TNRC18O15417 CDK7-214ENST00000626796 358 ntTSL 5 BASIC17.78■□□□□ 0.44
TNRC18O15417 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC17.78■□□□□ 0.44
TNRC18O15417 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC18O15417 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
TNRC18O15417 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC18O15417 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TNRC18O15417 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TNRC18O15417 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
TNRC18O15417 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.78■□□□□ 0.44
TNRC18O15417 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC18O15417 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.78■□□□□ 0.44
TNRC18O15417 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.78■□□□□ 0.44
TNRC18O15417 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.78■□□□□ 0.44
TNRC18O15417 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC18O15417 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TNRC18O15417 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TNRC18O15417 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.77■□□□□ 0.44
TNRC18O15417 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.77■□□□□ 0.44
TNRC18O15417 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.77■□□□□ 0.44
TNRC18O15417 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TNRC18O15417 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.77■□□□□ 0.44
TNRC18O15417 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.77■□□□□ 0.44
TNRC18O15417 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.77■□□□□ 0.44
TNRC18O15417 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.77■□□□□ 0.44
TNRC18O15417 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC17.77■□□□□ 0.44
TNRC18O15417 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.77■□□□□ 0.44
TNRC18O15417 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.77■□□□□ 0.44
TNRC18O15417 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TNRC18O15417 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.77■□□□□ 0.44
TNRC18O15417 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.77■□□□□ 0.44
TNRC18O15417 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TNRC18O15417 SERPINA13P-202ENST00000478994 924 ntBASIC17.77■□□□□ 0.44
TNRC18O15417 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.77■□□□□ 0.44
TNRC18O15417 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNRC18O15417 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TNRC18O15417 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TNRC18O15417 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
TNRC18O15417 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNRC18O15417 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.77■□□□□ 0.43
TNRC18O15417 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNRC18O15417 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TNRC18O15417 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC18O15417 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC18O15417 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC17.76■□□□□ 0.43
TNRC18O15417 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC17.76■□□□□ 0.43
TNRC18O15417 AC098935.1-201ENST00000446057 611 ntBASIC17.76■□□□□ 0.43
TNRC18O15417 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC17.76■□□□□ 0.43
TNRC18O15417 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.76■□□□□ 0.43
TNRC18O15417 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC17.76■□□□□ 0.43
TNRC18O15417 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.76■□□□□ 0.43
TNRC18O15417 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC18O15417 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.76■□□□□ 0.43
TNRC18O15417 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.76■□□□□ 0.43
TNRC18O15417 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC18O15417 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC18O15417 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC18O15417 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.76■□□□□ 0.43
TNRC18O15417 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC18O15417 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC17.76■□□□□ 0.43
TNRC18O15417 AL596276.2-201ENST00000447525 331 ntBASIC17.76■□□□□ 0.43
TNRC18O15417 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC17.76■□□□□ 0.43
TNRC18O15417 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TNRC18O15417 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.76■□□□□ 0.43
TNRC18O15417 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms