Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MID1O15344 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.72■□□□□ 0.27
MID1O15344 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 PCDHB17P-201ENST00000539533 2393 ntBASIC16.72■□□□□ 0.27
MID1O15344 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 AC139713.2-201ENST00000641328 2723 ntBASIC16.72■□□□□ 0.27
MID1O15344 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.72■□□□□ 0.27
MID1O15344 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.72■□□□□ 0.27
MID1O15344 MIR943-201ENST00000401286 94 ntBASIC16.72■□□□□ 0.27
MID1O15344 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.72■□□□□ 0.27
MID1O15344 SPDYE7P-202ENST00000420373 878 ntBASIC16.72■□□□□ 0.27
MID1O15344 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.72■□□□□ 0.27
MID1O15344 AC093214.1-201ENST00000511688 1107 ntBASIC16.72■□□□□ 0.27
MID1O15344 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.72■□□□□ 0.27
MID1O15344 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.72■□□□□ 0.27
MID1O15344 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.72■□□□□ 0.27
MID1O15344 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
MID1O15344 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.72■□□□□ 0.27
MID1O15344 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MID1O15344 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.72■□□□□ 0.27
MID1O15344 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.72■□□□□ 0.27
MID1O15344 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
MID1O15344 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.72■□□□□ 0.27
MID1O15344 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.72■□□□□ 0.27
MID1O15344 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MID1O15344 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.71■□□□□ 0.27
MID1O15344 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.71■□□□□ 0.27
MID1O15344 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MID1O15344 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MID1O15344 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
MID1O15344 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.71■□□□□ 0.27
MID1O15344 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 AC107890.1-201ENST00000422478 521 ntBASIC16.71■□□□□ 0.27
MID1O15344 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.71■□□□□ 0.27
MID1O15344 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.71■□□□□ 0.27
MID1O15344 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.71■□□□□ 0.27
MID1O15344 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.71■□□□□ 0.27
MID1O15344 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.71■□□□□ 0.27
MID1O15344 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MID1O15344 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MID1O15344 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MID1O15344 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
MID1O15344 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
MID1O15344 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
MID1O15344 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
MID1O15344 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MID1O15344 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.7■□□□□ 0.26
MID1O15344 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.7■□□□□ 0.26
MID1O15344 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
MID1O15344 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.7■□□□□ 0.26
MID1O15344 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
MID1O15344 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.7■□□□□ 0.26
MID1O15344 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC16.7■□□□□ 0.26
MID1O15344 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.7■□□□□ 0.26
MID1O15344 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.7■□□□□ 0.26
MID1O15344 AC055876.3-201ENST00000431496 288 ntBASIC16.7■□□□□ 0.26
MID1O15344 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
MID1O15344 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.7■□□□□ 0.26
MID1O15344 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.7■□□□□ 0.26
MID1O15344 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms