Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH17O14917 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDH17O14917 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 AC092171.3-201ENST00000610122 2651 ntBASIC16.03■□□□□ 0.16
PCDH17O14917 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 DOC2GP-204ENST00000639052 2548 ntBASIC16.03■□□□□ 0.16
PCDH17O14917 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH17O14917 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDH17O14917 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDH17O14917 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PCDH17O14917 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDH17O14917 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDH17O14917 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 CICP6-201ENST00000457191 2729 ntBASIC16.02■□□□□ 0.16
PCDH17O14917 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDH17O14917 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDH17O14917 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PCDH17O14917 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDH17O14917 COA5-202ENST00000409997 557 ntTSL 4 BASIC16.02■□□□□ 0.16
PCDH17O14917 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDH17O14917 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDH17O14917 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDH17O14917 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PCDH17O14917 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDH17O14917 AC079781.4-201ENST00000641908 219 ntBASIC16.02■□□□□ 0.16
PCDH17O14917 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDH17O14917 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH17O14917 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH17O14917 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH17O14917 AC092068.3-201ENST00000587894 2016 ntBASIC16.02■□□□□ 0.15
PCDH17O14917 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH17O14917 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.02■□□□□ 0.15
PCDH17O14917 AC078925.2-201ENST00000624013 1973 ntBASIC16.02■□□□□ 0.15
PCDH17O14917 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.02■□□□□ 0.15
PCDH17O14917 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH17O14917 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH17O14917 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDH17O14917 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH17O14917 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH17O14917 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH17O14917 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH17O14917 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
PCDH17O14917 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH17O14917 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH17O14917 AC112482.1-201ENST00000492080 688 ntBASIC16.01■□□□□ 0.15
PCDH17O14917 CXCL1P1-201ENST00000502804 216 ntBASIC16.01■□□□□ 0.15
PCDH17O14917 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.01■□□□□ 0.15
PCDH17O14917 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.01■□□□□ 0.15
PCDH17O14917 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH17O14917 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.01■□□□□ 0.15
PCDH17O14917 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDH17O14917 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDH17O14917 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.01■□□□□ 0.15
PCDH17O14917 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
PCDH17O14917 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PCDH17O14917 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCDH17O14917 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCDH17O14917 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
PCDH17O14917 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDH17O14917 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16■□□□□ 0.15
PCDH17O14917 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDH17O14917 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16■□□□□ 0.15
PCDH17O14917 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
PCDH17O14917 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
PCDH17O14917 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
PCDH17O14917 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PCDH17O14917 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PCDH17O14917 MKNK2P1-201ENST00000437526 628 ntBASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms