Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 AC079781.3-201ENST00000449110 356 ntBASIC19.13■□□□□ 0.65
CLIC4Q9Y696 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 AC091167.2-201ENST00000579581 588 ntBASIC19.13■□□□□ 0.65
CLIC4Q9Y696 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 CYP2A7P1-201ENST00000595391 815 ntBASIC19.13■□□□□ 0.65
CLIC4Q9Y696 AL121912.1-201ENST00000603683 238 ntBASIC19.13■□□□□ 0.65
CLIC4Q9Y696 AC008667.4-201ENST00000607370 168 ntBASIC19.13■□□□□ 0.65
CLIC4Q9Y696 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
CLIC4Q9Y696 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 IGHV3-65-201ENST00000523210 341 ntBASIC19.12■□□□□ 0.65
CLIC4Q9Y696 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLIC4Q9Y696 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.11■□□□□ 0.65
CLIC4Q9Y696 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 OR7E47P-204ENST00000575924 449 ntBASIC19.11■□□□□ 0.65
CLIC4Q9Y696 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.11■□□□□ 0.65
CLIC4Q9Y696 AL356488.2-201ENST00000602755 427 ntBASIC19.11■□□□□ 0.65
CLIC4Q9Y696 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 GGTLC5P-201ENST00000617623 998 ntBASIC19.11■□□□□ 0.65
CLIC4Q9Y696 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLIC4Q9Y696 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLIC4Q9Y696 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms