Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
CDC42BPBQ9Y5S2 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 FAM86MP-201ENST00000340703 885 ntBASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 AC026979.3-201ENST00000607315 403 ntBASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 AC020765.3-201ENST00000613051 740 ntBASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 CLK3P2-201ENST00000427566 1453 ntBASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
CDC42BPBQ9Y5S2 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 AL136982.4-201ENST00000437689 1740 ntBASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 SDHAP3-202ENST00000515467 728 ntBASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 AP005482.1-201ENST00000563722 1273 ntBASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 MIR6775-201ENST00000617557 69 ntBASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 COX11-210ENST00000639671 696 ntBASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 PP12613-201ENST00000424958 2230 ntBASIC24.85■■□□□ 1.57
CDC42BPBQ9Y5S2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 AL645728.1-201ENST00000366221 2101 ntBASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 CYP4F24P-201ENST00000586049 1580 ntBASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 AC092658.1-201ENST00000505836 891 ntBASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 LINC01115-203ENST00000606068 577 ntBASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 CD276-203ENST00000537340 2439 ntTSL 2 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CDC42BPBQ9Y5S2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CDC42BPBQ9Y5S2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms