Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 KRT18P32-201ENST00000424695 1287 ntBASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 KRT8P23-201ENST00000560090 1207 ntBASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 LINC01225-203ENST00000563550 1244 ntBASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 LINC00628-201ENST00000628516 1289 ntBASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.88□□□□□ -0.03
CLCF1Q9UBD9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 AC109322.1-201ENST00000524499 1264 ntBASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 AC004449.1-201ENST00000564240 433 ntBASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CLCF1Q9UBD9 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 FAM58DP-201ENST00000428076 619 ntBASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 IGHV3-62-201ENST00000520057 340 ntBASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 AC008267.7-201ENST00000624570 1194 ntBASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.86□□□□□ -0.03
CLCF1Q9UBD9 AC084121.4-201ENST00000641598 221 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms