Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 AC087499.5-201ENST00000452760 1342 ntBASIC18.61■□□□□ 0.57
VTA1Q9NP79 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 MTND6P24-201ENST00000440466 518 ntBASIC18.61■□□□□ 0.57
VTA1Q9NP79 AC244107.1-201ENST00000442033 332 ntBASIC18.61■□□□□ 0.57
VTA1Q9NP79 GAPDHP21-201ENST00000450301 1010 ntBASIC18.61■□□□□ 0.57
VTA1Q9NP79 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 SPDYE22P-201ENST00000582158 798 ntBASIC18.61■□□□□ 0.57
VTA1Q9NP79 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 AL589739.1-201ENST00000607720 493 ntBASIC18.61■□□□□ 0.57
VTA1Q9NP79 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 AL358472.5-202ENST00000641448 1267 ntBASIC18.61■□□□□ 0.57
VTA1Q9NP79 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VTA1Q9NP79 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VTA1Q9NP79 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 PCDHB17P-201ENST00000539533 2393 ntBASIC18.6■□□□□ 0.57
VTA1Q9NP79 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 AP005018.1-201ENST00000525475 301 ntBASIC18.6■□□□□ 0.57
VTA1Q9NP79 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 BANF1P1-201ENST00000553684 263 ntBASIC18.6■□□□□ 0.57
VTA1Q9NP79 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 AC105021.1-202ENST00000570572 669 ntBASIC18.6■□□□□ 0.57
VTA1Q9NP79 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.6■□□□□ 0.57
VTA1Q9NP79 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VTA1Q9NP79 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTA1Q9NP79 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTA1Q9NP79 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTA1Q9NP79 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTA1Q9NP79 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTA1Q9NP79 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VTA1Q9NP79 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTA1Q9NP79 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTA1Q9NP79 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTA1Q9NP79 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 SPTLC1P1-201ENST00000447199 261 ntBASIC18.59■□□□□ 0.57
VTA1Q9NP79 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VTA1Q9NP79 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.59■□□□□ 0.57
VTA1Q9NP79 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms