Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 ELL2P1-201ENST00000413990 1906 ntBASIC19.72■□□□□ 0.75
RNF41Q9H4P4 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF41Q9H4P4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 FAM86C2P-203ENST00000528684 1004 ntBASIC19.71■□□□□ 0.75
RNF41Q9H4P4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.71■□□□□ 0.75
RNF41Q9H4P4 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 HLA-A-202ENST00000376806 1854 ntBASIC19.71■□□□□ 0.75
RNF41Q9H4P4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF41Q9H4P4 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 CD82-202ENST00000342935 967 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 MIR1233-2-201ENST00000408138 82 ntBASIC19.7■□□□□ 0.74
RNF41Q9H4P4 MIR1233-1-201ENST00000408722 82 ntBASIC19.7■□□□□ 0.74
RNF41Q9H4P4 AL355306.1-201ENST00000415580 579 ntBASIC19.7■□□□□ 0.74
RNF41Q9H4P4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 RARRES2P8-201ENST00000566335 367 ntBASIC19.7■□□□□ 0.74
RNF41Q9H4P4 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 MIR4469-201ENST00000583919 79 ntBASIC19.7■□□□□ 0.74
RNF41Q9H4P4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
RNF41Q9H4P4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms