Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 BTNL10-201ENST00000595971 695 ntBASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 ABALON-201ENST00000629058 1903 ntBASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 PDIA3P1-201ENST00000471856 1510 ntBASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
ZNF541Q9H0D2 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 CTBP2P5-201ENST00000454986 1264 ntBASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 AC092337.1-201ENST00000568699 1129 ntBASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 CLK3P2-201ENST00000427566 1453 ntBASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.8■□□□□ 0.76
ZNF541Q9H0D2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 AC099336.1-201ENST00000417053 1171 ntBASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 AC099548.2-209ENST00000480264 625 ntBASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 AC020907.1-201ENST00000616460 1350 ntBASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
ZNF541Q9H0D2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 RRP7BP-205ENST00000566851 833 ntBASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 AC061975.2-201ENST00000581722 295 ntBASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 AC244093.1-201ENST00000610837 814 ntBASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.78■□□□□ 0.76
ZNF541Q9H0D2 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
ZNF541Q9H0D2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms