Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 AC026691.1-201ENST00000602502 2017 ntBASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 SCARNA2-201ENST00000458748 420 ntBASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 AC009078.2-202ENST00000463353 338 ntBASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 SLC25A6P2-201ENST00000497974 877 ntBASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 AC013467.2-201ENST00000605472 835 ntBASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 CROCCP1-201ENST00000426910 5675 ntBASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
UPF3BQ9BZI7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 RPS2P1-201ENST00000434010 821 ntBASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 REXO1L3P-201ENST00000622202 1288 ntBASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
UPF3BQ9BZI7 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
UPF3BQ9BZI7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
UPF3BQ9BZI7 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
UPF3BQ9BZI7 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.02■□□□□ 0.79
UPF3BQ9BZI7 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 CYP2T1P-202ENST00000641596 2535 ntBASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 HLA-J-202ENST00000469281 1241 ntBASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 AL160237.2-201ENST00000556165 472 ntBASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 TP73-AS1-207ENST00000624167 988 ntBASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 AC107918.4-202ENST00000641623 219 ntBASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
UPF3BQ9BZI7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms