Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 MTDHP5-201ENST00000598980 586 ntBASIC11.73□□□□□ -0.53
UPK3BQ9BT76 GPALPP1-207ENST00000611650 899 ntBASIC11.73□□□□□ -0.53
UPK3BQ9BT76 AC006538.3-201ENST00000612495 578 ntBASIC11.73□□□□□ -0.53
UPK3BQ9BT76 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
UPK3BQ9BT76 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 AC129492.6-201ENST00000611383 1305 ntBASIC11.72□□□□□ -0.53
UPK3BQ9BT76 AL136379.1-201ENST00000623471 2642 ntBASIC11.72□□□□□ -0.53
UPK3BQ9BT76 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 OR7E47P-204ENST00000575924 449 ntBASIC11.72□□□□□ -0.53
UPK3BQ9BT76 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 NF2-208ENST00000403435 2568 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC11.72□□□□□ -0.53
UPK3BQ9BT76 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 C8orf49-201ENST00000525043 1968 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 YBX2P1-201ENST00000394192 760 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 MIR1233-2-201ENST00000408138 82 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 MIR1233-1-201ENST00000408722 82 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 IGLL3P-201ENST00000412472 434 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 MCCD1P2-201ENST00000423228 335 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 RHOQP3-201ENST00000437982 621 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 AC087163.2-201ENST00000457299 853 ntBASIC11.71□□□□□ -0.53
UPK3BQ9BT76 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC11.71□□□□□ -0.53
UPK3BQ9BT76 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.71□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms