Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
HDHD3Q9BSH5 TSPY26P-202ENST00000565928 3884 ntBASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
HDHD3Q9BSH5 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 PCED1CP-201ENST00000419887 785 ntBASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 HLA-J-202ENST00000469281 1241 ntBASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 AP000867.3-201ENST00000524675 377 ntBASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 SIGLEC16-201ENST00000599858 1437 ntBASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 KRT8P49-201ENST00000604166 1432 ntBASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
HDHD3Q9BSH5 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 AL365203.3-201ENST00000609742 2057 ntBASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 NUS1P2-201ENST00000417358 873 ntBASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 AL049597.2-201ENST00000565575 961 ntBASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
HDHD3Q9BSH5 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms