Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.85■■□□□ 1.09
ABCA3Q99758 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC21.85■■□□□ 1.09
ABCA3Q99758 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.85■■□□□ 1.09
ABCA3Q99758 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC21.85■■□□□ 1.09
ABCA3Q99758 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
ABCA3Q99758 AZGP1P1-201ENST00000411909 902 ntBASIC21.85■■□□□ 1.09
ABCA3Q99758 HLA-DPB2-205ENST00000435074 1188 ntBASIC21.85■■□□□ 1.09
ABCA3Q99758 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC21.85■■□□□ 1.09
ABCA3Q99758 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 AGER-214ENST00000538695 487 ntTSL 2 BASIC21.85■■□□□ 1.09
ABCA3Q99758 ARL16-210ENST00000574938 751 ntTSL 2 BASIC21.85■■□□□ 1.09
ABCA3Q99758 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
ABCA3Q99758 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.85■■□□□ 1.09
ABCA3Q99758 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 LINC02012-201ENST00000608206 1725 ntBASIC21.85■■□□□ 1.09
ABCA3Q99758 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
ABCA3Q99758 RHBDF1P1-201ENST00000427504 1941 ntBASIC21.84■■□□□ 1.09
ABCA3Q99758 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC21.84■■□□□ 1.09
ABCA3Q99758 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC21.84■■□□□ 1.09
ABCA3Q99758 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
ABCA3Q99758 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC21.84■■□□□ 1.09
ABCA3Q99758 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 RPL7P3-201ENST00000441388 714 ntBASIC21.84■■□□□ 1.09
ABCA3Q99758 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC21.84■■□□□ 1.09
ABCA3Q99758 RHOQP1-201ENST00000555758 579 ntBASIC21.84■■□□□ 1.09
ABCA3Q99758 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC21.84■■□□□ 1.09
ABCA3Q99758 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC21.84■■□□□ 1.09
ABCA3Q99758 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC21.84■■□□□ 1.09
ABCA3Q99758 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
ABCA3Q99758 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
ABCA3Q99758 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC21.84■■□□□ 1.09
ABCA3Q99758 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC21.84■■□□□ 1.09
ABCA3Q99758 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC21.84■■□□□ 1.09
ABCA3Q99758 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC21.84■■□□□ 1.09
ABCA3Q99758 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
ABCA3Q99758 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 INTS4P2-202ENST00000614726 2019 ntBASIC21.84■■□□□ 1.09
ABCA3Q99758 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
ABCA3Q99758 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ABCA3Q99758 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ABCA3Q99758 FO681548.1-201ENST00000455617 1132 ntBASIC21.83■■□□□ 1.09
ABCA3Q99758 KRT90P-201ENST00000549264 1064 ntBASIC21.83■■□□□ 1.09
ABCA3Q99758 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ABCA3Q99758 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
ABCA3Q99758 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
ABCA3Q99758 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC21.83■■□□□ 1.09
ABCA3Q99758 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
ABCA3Q99758 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
ABCA3Q99758 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.83■■□□□ 1.09
ABCA3Q99758 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ABCA3Q99758 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ABCA3Q99758 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC21.83■■□□□ 1.09
ABCA3Q99758 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
ABCA3Q99758 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ABCA3Q99758 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
ABCA3Q99758 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC21.83■■□□□ 1.08
ABCA3Q99758 AL139010.1-201ENST00000454878 894 ntBASIC21.83■■□□□ 1.08
ABCA3Q99758 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC21.83■■□□□ 1.08
ABCA3Q99758 AC106760.1-201ENST00000508690 800 ntBASIC21.83■■□□□ 1.08
ABCA3Q99758 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC21.83■■□□□ 1.08
ABCA3Q99758 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC21.83■■□□□ 1.08
ABCA3Q99758 CU634019.7-201ENST00000624153 1185 ntBASIC21.83■■□□□ 1.08
ABCA3Q99758 FP236241.2-201ENST00000624906 1185 ntBASIC21.83■■□□□ 1.08
ABCA3Q99758 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
ABCA3Q99758 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC21.83■■□□□ 1.08
ABCA3Q99758 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
ABCA3Q99758 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC21.82■■□□□ 1.08
ABCA3Q99758 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
ABCA3Q99758 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC21.82■■□□□ 1.08
ABCA3Q99758 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
ABCA3Q99758 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
ABCA3Q99758 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
ABCA3Q99758 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.82■■□□□ 1.08
ABCA3Q99758 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms