Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 PMS2P7-201ENST00000506558 1336 ntBASIC13.92□□□□□ -0.18
GAFA1Q96PS6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.92□□□□□ -0.18
GAFA1Q96PS6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 NMU-203ENST00000507338 658 ntTSL 3 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GAFA1Q96PS6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 AC092919.2-201ENST00000623631 1645 ntBASIC13.91□□□□□ -0.18
GAFA1Q96PS6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 AC140658.5-201ENST00000438532 169 ntBASIC13.91□□□□□ -0.18
GAFA1Q96PS6 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 AC002347.1-201ENST00000569543 541 ntBASIC13.91□□□□□ -0.18
GAFA1Q96PS6 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 MIR3909-201ENST00000579518 119 ntBASIC13.91□□□□□ -0.18
GAFA1Q96PS6 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GAFA1Q96PS6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
GAFA1Q96PS6 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms