Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
COL21A1Q96P44 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
COL21A1Q96P44 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.89■□□□□ 0.13
COL21A1Q96P44 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 MRPL3P1-201ENST00000400109 1033 ntBASIC15.89■□□□□ 0.13
COL21A1Q96P44 HNRNPDP1-201ENST00000439535 754 ntBASIC15.89■□□□□ 0.13
COL21A1Q96P44 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 AC009078.2-202ENST00000463353 338 ntBASIC15.89■□□□□ 0.13
COL21A1Q96P44 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 AL353135.1-201ENST00000606729 504 ntBASIC15.89■□□□□ 0.13
COL21A1Q96P44 AL139424.1-201ENST00000607572 797 ntBASIC15.89■□□□□ 0.13
COL21A1Q96P44 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 AC148477.8-201ENST00000624298 468 ntBASIC15.89■□□□□ 0.13
COL21A1Q96P44 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
COL21A1Q96P44 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
COL21A1Q96P44 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 AL596257.1-201ENST00000641463 2694 ntBASIC15.88■□□□□ 0.13
COL21A1Q96P44 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 SLC25A6P4-201ENST00000586535 553 ntBASIC15.88■□□□□ 0.13
COL21A1Q96P44 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 AC004706.3-202ENST00000621574 984 ntBASIC15.88■□□□□ 0.13
COL21A1Q96P44 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
COL21A1Q96P44 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
COL21A1Q96P44 CYP2T1P-202ENST00000641596 2535 ntBASIC15.88■□□□□ 0.13
COL21A1Q96P44 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.87■□□□□ 0.13
COL21A1Q96P44 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms