Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 ELL2P1-201ENST00000413990 1906 ntBASIC17.25■□□□□ 0.35
RPRD1AQ96P16 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
RPRD1AQ96P16 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 ACTG1P14-201ENST00000446382 1122 ntBASIC17.24■□□□□ 0.35
RPRD1AQ96P16 YBX1P5-201ENST00000509441 847 ntBASIC17.24■□□□□ 0.35
RPRD1AQ96P16 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 AC109635.5-201ENST00000533593 962 ntBASIC17.24■□□□□ 0.35
RPRD1AQ96P16 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 GPALPP1-207ENST00000611650 899 ntBASIC17.24■□□□□ 0.35
RPRD1AQ96P16 AC006538.3-201ENST00000612495 578 ntBASIC17.24■□□□□ 0.35
RPRD1AQ96P16 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 AC139530.3-201ENST00000620344 690 ntBASIC17.24■□□□□ 0.35
RPRD1AQ96P16 AC055717.3-201ENST00000622967 595 ntBASIC17.24■□□□□ 0.35
RPRD1AQ96P16 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 F11R-206ENST00000621309 4770 ntTSL 5 BASIC17.24■□□□□ 0.35
RPRD1AQ96P16 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 PMS2P4-201ENST00000412466 1052 ntBASIC17.23■□□□□ 0.35
RPRD1AQ96P16 AC211486.1-202ENST00000416371 468 ntBASIC17.23■□□□□ 0.35
RPRD1AQ96P16 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 AC211476.1-201ENST00000503899 468 ntBASIC17.23■□□□□ 0.35
RPRD1AQ96P16 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 MIR3909-201ENST00000579518 119 ntBASIC17.23■□□□□ 0.35
RPRD1AQ96P16 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 RNF216P1-203ENST00000404404 2427 ntBASIC17.23■□□□□ 0.35
RPRD1AQ96P16 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RPRD1AQ96P16 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.22■□□□□ 0.35
RPRD1AQ96P16 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms