Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.64□□□□□ -0.23
ZNF48Q96MX3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 FAM86GP-201ENST00000448322 971 ntBASIC13.64□□□□□ -0.23
ZNF48Q96MX3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 DUX4L17-201ENST00000557360 1267 ntBASIC13.64□□□□□ -0.23
ZNF48Q96MX3 AL135744.1-201ENST00000565098 629 ntBASIC13.64□□□□□ -0.23
ZNF48Q96MX3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 Z92544.3-201ENST00000624747 417 ntBASIC13.64□□□□□ -0.23
ZNF48Q96MX3 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.64□□□□□ -0.23
ZNF48Q96MX3 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 FAM58DP-201ENST00000428076 619 ntBASIC13.63□□□□□ -0.23
ZNF48Q96MX3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 RARRES2P8-201ENST00000566335 367 ntBASIC13.63□□□□□ -0.23
ZNF48Q96MX3 AL390955.2-201ENST00000603032 514 ntBASIC13.63□□□□□ -0.23
ZNF48Q96MX3 AL096865.1-201ENST00000606796 927 ntBASIC13.63□□□□□ -0.23
ZNF48Q96MX3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ZNF48Q96MX3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 488 ms