Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
UBE2E2Q96LR5 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 AKAP8P1-201ENST00000434743 1349 ntBASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 RPS8P6-201ENST00000426177 609 ntBASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 AP000344.2-201ENST00000512987 629 ntBASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 RARRES2P8-201ENST00000566335 367 ntBASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 AL139011.1-202ENST00000642063 584 ntBASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 AP001094.4-201ENST00000579008 2176 ntBASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.97□□□□□ -0.33
UBE2E2Q96LR5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 PCDHB17P-201ENST00000539533 2393 ntBASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
UBE2E2Q96LR5 AL355306.1-201ENST00000415580 579 ntBASIC12.96□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms