Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 AC009113.1-201ENST00000570267 2443 ntBASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 CDC14C-201ENST00000428251 1719 ntBASIC17.98■□□□□ 0.47
TRIM43Q96BQ3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 AC092933.1-201ENST00000393644 945 ntBASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 RPSAP52-203ENST00000622976 1023 ntBASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 ABALON-201ENST00000629058 1903 ntBASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRIM43Q96BQ3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 AC004945.1-201ENST00000416738 983 ntBASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 USP32P1-208ENST00000506594 1164 ntBASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRIM43Q96BQ3 AC093525.8-201ENST00000624099 1342 ntBASIC17.96■□□□□ 0.46
TRIM43Q96BQ3 AC098818.2-201ENST00000564925 2320 ntBASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 AC010319.3-201ENST00000597028 470 ntBASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRIM43Q96BQ3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms