Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 AC092364.2-201ENST00000596710 2692 ntBASIC17.99■□□□□ 0.47
SEMA4DQ92854 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 RNU1-129P-201ENST00000384064 167 ntBASIC17.99■□□□□ 0.47
SEMA4DQ92854 MED15P5-201ENST00000423150 992 ntBASIC17.99■□□□□ 0.47
SEMA4DQ92854 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.99■□□□□ 0.47
SEMA4DQ92854 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 U1.21-201ENST00000580816 167 ntBASIC17.99■□□□□ 0.47
SEMA4DQ92854 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 AC023141.13-201ENST00000604991 943 ntBASIC17.99■□□□□ 0.47
SEMA4DQ92854 AC027601.4-201ENST00000611259 610 ntBASIC17.99■□□□□ 0.47
SEMA4DQ92854 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
SEMA4DQ92854 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
SEMA4DQ92854 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 MIR574-201ENST00000385209 96 ntBASIC17.98■□□□□ 0.47
SEMA4DQ92854 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 KRT18P3-201ENST00000451602 1288 ntBASIC17.98■□□□□ 0.47
SEMA4DQ92854 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.98■□□□□ 0.47
SEMA4DQ92854 AC092919.2-201ENST00000623631 1645 ntBASIC17.98■□□□□ 0.47
SEMA4DQ92854 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
SEMA4DQ92854 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
SEMA4DQ92854 MIR940-201ENST00000401276 94 ntBASIC17.97■□□□□ 0.47
SEMA4DQ92854 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
SEMA4DQ92854 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms