Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT9Q92600 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT9Q92600 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CNOT9Q92600 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CNOT9Q92600 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.49■□□□□ 0.07
CNOT9Q92600 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.49■□□□□ 0.07
CNOT9Q92600 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT9Q92600 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CNOT9Q92600 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.49■□□□□ 0.07
CNOT9Q92600 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT9Q92600 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CNOT9Q92600 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.49■□□□□ 0.07
CNOT9Q92600 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CNOT9Q92600 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CNOT9Q92600 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.48■□□□□ 0.07
CNOT9Q92600 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CNOT9Q92600 AL513477.1-201ENST00000602865 2407 ntBASIC15.48■□□□□ 0.07
CNOT9Q92600 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CNOT9Q92600 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT9Q92600 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT9Q92600 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CNOT9Q92600 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CNOT9Q92600 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
CNOT9Q92600 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 AC004870.1-201ENST00000315132 882 ntBASIC15.48■□□□□ 0.07
CNOT9Q92600 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.48■□□□□ 0.07
CNOT9Q92600 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.48■□□□□ 0.07
CNOT9Q92600 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CNOT9Q92600 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.48■□□□□ 0.07
CNOT9Q92600 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.48■□□□□ 0.07
CNOT9Q92600 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.48■□□□□ 0.07
CNOT9Q92600 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.48■□□□□ 0.07
CNOT9Q92600 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.48■□□□□ 0.07
CNOT9Q92600 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CNOT9Q92600 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.47■□□□□ 0.07
CNOT9Q92600 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC15.47■□□□□ 0.07
CNOT9Q92600 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.47■□□□□ 0.07
CNOT9Q92600 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.47■□□□□ 0.07
CNOT9Q92600 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 AL356488.2-201ENST00000602755 427 ntBASIC15.47■□□□□ 0.07
CNOT9Q92600 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 MIR1199-201ENST00000621445 119 ntBASIC15.47■□□□□ 0.07
CNOT9Q92600 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.47■□□□□ 0.07
CNOT9Q92600 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CNOT9Q92600 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
CNOT9Q92600 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CNOT9Q92600 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
CNOT9Q92600 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.46■□□□□ 0.07
CNOT9Q92600 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CNOT9Q92600 AC006538.1-201ENST00000567905 1585 ntBASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms