Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 AL162726.2-201ENST00000438986 1017 ntBASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 AC104784.1-201ENST00000473096 294 ntBASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRUNE2Q8WUY3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.21■□□□□ 0.34
PRUNE2Q8WUY3 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
PRUNE2Q8WUY3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 AL355312.1-201ENST00000407115 2176 ntBASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 KRT8P22-201ENST00000562317 1415 ntBASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 MPV17-204ENST00000399052 749 ntTSL 4 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 RN7SL555P-201ENST00000584742 339 ntBASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 AL008638.5-201ENST00000623814 1298 ntBASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRUNE2Q8WUY3 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 AC068587.3-201ENST00000526613 355 ntBASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 AL391069.4-201ENST00000609583 481 ntBASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 CLK3P2-201ENST00000427566 1453 ntBASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 AC004898.1-201ENST00000451057 766 ntBASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 AC091167.2-201ENST00000579581 588 ntBASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 HNRNPA1P48-201ENST00000562726 1377 ntBASIC17.19■□□□□ 0.34
PRUNE2Q8WUY3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms