Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 PKD1P1-201ENST00000458669 6805 ntBASIC15.52■□□□□ 0.08
CT55Q8WUE5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 AL353705.2-201ENST00000428243 662 ntBASIC15.52■□□□□ 0.08
CT55Q8WUE5 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.52■□□□□ 0.08
CT55Q8WUE5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CT55Q8WUE5 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CT55Q8WUE5 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.52■□□□□ 0.07
CT55Q8WUE5 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CT55Q8WUE5 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CT55Q8WUE5 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CT55Q8WUE5 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC15.52■□□□□ 0.07
CT55Q8WUE5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CT55Q8WUE5 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 AC068880.1-201ENST00000507289 2297 ntBASIC15.51■□□□□ 0.07
CT55Q8WUE5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 DPM2-202ENST00000373110 738 ntTSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 FAM220BP-201ENST00000377689 816 ntBASIC15.51■□□□□ 0.07
CT55Q8WUE5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 HLA-V-204ENST00000476601 1289 ntBASIC15.51■□□□□ 0.07
CT55Q8WUE5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 AC005225.4-201ENST00000557330 545 ntBASIC15.51■□□□□ 0.07
CT55Q8WUE5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 KRT8P39-201ENST00000396270 1433 ntBASIC15.51■□□□□ 0.07
CT55Q8WUE5 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.51■□□□□ 0.07
CT55Q8WUE5 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CT55Q8WUE5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 AC022144.1-201ENST00000602255 1580 ntBASIC15.5■□□□□ 0.07
CT55Q8WUE5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CT55Q8WUE5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 SNX33P1-201ENST00000592116 1762 ntBASIC15.5■□□□□ 0.07
CT55Q8WUE5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CT55Q8WUE5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CT55Q8WUE5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CT55Q8WUE5 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CT55Q8WUE5 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CT55Q8WUE5 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 MTND6P24-201ENST00000440466 518 ntBASIC15.5■□□□□ 0.07
CT55Q8WUE5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.5■□□□□ 0.07
CT55Q8WUE5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CT55Q8WUE5 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms