Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 KRT18P55-202ENST00000578578 1546 ntBASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SNIP1Q8TAD8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 POLE2-203ENST00000553805 496 ntTSL 2 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 AC091167.2-201ENST00000579581 588 ntBASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 AC005786.4-201ENST00000623369 682 ntBASIC15.77■□□□□ 0.12
SNIP1Q8TAD8 AP3S2-216ENST00000617003 1561 ntBASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SNIP1Q8TAD8 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 OR6D1P-203ENST00000641209 4860 ntBASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 DFFBP1-201ENST00000433250 979 ntBASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 AC011495.1-201ENST00000498085 584 ntBASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SNIP1Q8TAD8 AL391825.1-201ENST00000457671 1364 ntBASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
SNIP1Q8TAD8 AC087499.6-201ENST00000411576 835 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms