Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 AC005915.1-201ENST00000624912 2018 ntBASIC17.98■□□□□ 0.47
BEST2Q8NFU1 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 METTL21AP1-201ENST00000438852 635 ntBASIC17.98■□□□□ 0.47
BEST2Q8NFU1 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 SNX33P1-201ENST00000592116 1762 ntBASIC17.98■□□□□ 0.47
BEST2Q8NFU1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
BEST2Q8NFU1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 AC016027.1-202ENST00000607927 1699 ntBASIC17.97■□□□□ 0.47
BEST2Q8NFU1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 AC105020.1-201ENST00000435356 2205 ntBASIC17.97■□□□□ 0.47
BEST2Q8NFU1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 AC079140.1-201ENST00000508039 487 ntBASIC17.97■□□□□ 0.47
BEST2Q8NFU1 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 AC243562.1-201ENST00000560672 389 ntBASIC17.97■□□□□ 0.47
BEST2Q8NFU1 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
BEST2Q8NFU1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 AL355385.1-201ENST00000606123 409 ntBASIC17.96■□□□□ 0.47
BEST2Q8NFU1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BEST2Q8NFU1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms