Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 CBR1-202ENST00000399191 838 ntTSL 3 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 GID4-202ENST00000376345 1391 ntTSL 3 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 AL121761.2-201ENST00000598007 1648 ntBASIC5.21□□□□□ -1.58
SYNE1Q8NF91 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 LETM1P2-201ENST00000597330 2178 ntBASIC5.21□□□□□ -1.58
SYNE1Q8NF91 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 NABP1-203ENST00000409510 843 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 AC074386.1-202ENST00000463561 864 ntBASIC5.21□□□□□ -1.58
SYNE1Q8NF91 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 TSEN15P1-201ENST00000423257 515 ntBASIC5.21□□□□□ -1.58
SYNE1Q8NF91 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 AC051619.7-201ENST00000568314 623 ntBASIC5.21□□□□□ -1.58
SYNE1Q8NF91 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 AL096865.1-201ENST00000606796 927 ntBASIC5.21□□□□□ -1.58
SYNE1Q8NF91 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 AC099398.1-201ENST00000567919 2776 ntBASIC5.21□□□□□ -1.58
SYNE1Q8NF91 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 MIR346-201ENST00000362234 95 ntBASIC5.21□□□□□ -1.58
SYNE1Q8NF91 RPL30-202ENST00000396070 440 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 AP002472.1-201ENST00000577490 586 ntBASIC5.21□□□□□ -1.58
SYNE1Q8NF91 CYB561-216ENST00000582297 897 ntTSL 3 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 ACTL9-202ENST00000612068 1252 ntBASIC5.21□□□□□ -1.58
SYNE1Q8NF91 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
SYNE1Q8NF91 LINC00304-203ENST00000565008 1864 ntBASIC5.2□□□□□ -1.58
SYNE1Q8NF91 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNE1Q8NF91 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNE1Q8NF91 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC5.2□□□□□ -1.58
SYNE1Q8NF91 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SYNE1Q8NF91 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms