Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 YBX2P1-201ENST00000394192 760 ntBASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 AC021097.1-201ENST00000607902 574 ntBASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.79□□□□□ -0.04
ZIC4Q8N9L1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 GGT3P-204ENST00000453783 1664 ntBASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 MTDHP5-201ENST00000598980 586 ntBASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 AC084018.2-201ENST00000613093 2607 ntBASIC14.78□□□□□ -0.04
ZIC4Q8N9L1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.77□□□□□ -0.04
ZIC4Q8N9L1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ZIC4Q8N9L1 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms