Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
EFCAB3Q8N7B9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
EFCAB3Q8N7B9 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 FAM220CP-201ENST00000395253 831 ntBASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 FGA-203ENST00000622532 1130 ntTSL 5 BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 AC092364.2-201ENST00000596710 2692 ntBASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
EFCAB3Q8N7B9 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 AC007950.2-201ENST00000615045 2347 ntBASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 AC016396.2-201ENST00000562575 1417 ntBASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 MINOS1P3-201ENST00000457048 203 ntBASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 REXO1L6P-202ENST00000619970 1078 ntBASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
EFCAB3Q8N7B9 BX276092.7-203ENST00000637198 1536 ntBASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 AF186996.4-201ENST00000467186 377 ntBASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 AC091607.1-201ENST00000490318 1060 ntBASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 AC008567.2-201ENST00000589751 656 ntTSL 3 BASIC16.8■□□□□ 0.28
EFCAB3Q8N7B9 AC005336.2-201ENST00000593183 939 ntBASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms