Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 AC005498.2-205ENST00000593218 784 ntBASIC18.19■□□□□ 0.5
VPS52Q8N1B4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.19■□□□□ 0.5
VPS52Q8N1B4 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 AL035633.1-201ENST00000406139 838 ntBASIC18.18■□□□□ 0.5
VPS52Q8N1B4 AL592309.1-201ENST00000443127 649 ntBASIC18.18■□□□□ 0.5
VPS52Q8N1B4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
VPS52Q8N1B4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 TFAMP1-201ENST00000412727 736 ntBASIC18.17■□□□□ 0.5
VPS52Q8N1B4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 MIR4515-201ENST00000584082 81 ntBASIC18.17■□□□□ 0.5
VPS52Q8N1B4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 HNRNPRP1-201ENST00000453465 1695 ntBASIC18.17■□□□□ 0.5
VPS52Q8N1B4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
VPS52Q8N1B4 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms