Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 AL671710.1-201ENST00000610245 2349 ntBASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRTM4Q86VH4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 AC254562.1-201ENST00000417586 456 ntBASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 ADH5P3-201ENST00000433842 1137 ntBASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 AC026120.1-201ENST00000611536 926 ntBASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 SNX33P1-201ENST00000592116 1762 ntBASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
LRRTM4Q86VH4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 WASH6P-202ENST00000359512 1437 ntBASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 TFAMP1-201ENST00000412727 736 ntBASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 DNAJB3-202ENST00000449667 1266 ntBASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 SPDYE11-202ENST00000450699 704 ntBASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 RN7SL589P-201ENST00000481268 310 ntBASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 SNHG9-202ENST00000564014 471 ntBASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 SPDYE9P-201ENST00000570642 692 ntBASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
LRRTM4Q86VH4 SPDYE10P-202ENST00000612005 668 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 143.4 ms