Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LDB1Q86U70 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LDB1Q86U70 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LDB1Q86U70 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.75■□□□□ 0.27
LDB1Q86U70 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.75■□□□□ 0.27
LDB1Q86U70 TPM4P1-201ENST00000436100 807 ntBASIC16.75■□□□□ 0.27
LDB1Q86U70 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.75■□□□□ 0.27
LDB1Q86U70 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.75■□□□□ 0.27
LDB1Q86U70 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.75■□□□□ 0.27
LDB1Q86U70 MIR4492-201ENST00000581627 80 ntBASIC16.75■□□□□ 0.27
LDB1Q86U70 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.75■□□□□ 0.27
LDB1Q86U70 AC013467.2-201ENST00000605472 835 ntBASIC16.75■□□□□ 0.27
LDB1Q86U70 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.75■□□□□ 0.27
LDB1Q86U70 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
LDB1Q86U70 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LDB1Q86U70 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LDB1Q86U70 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.75■□□□□ 0.27
LDB1Q86U70 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB1Q86U70 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.74■□□□□ 0.27
LDB1Q86U70 HLA-A-201ENST00000376802 1334 ntBASIC16.74■□□□□ 0.27
LDB1Q86U70 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
LDB1Q86U70 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LDB1Q86U70 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
LDB1Q86U70 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 AC131009.4-201ENST00000624048 1740 ntBASIC16.74■□□□□ 0.27
LDB1Q86U70 AC006538.1-201ENST00000567905 1585 ntBASIC16.74■□□□□ 0.27
LDB1Q86U70 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB1Q86U70 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB1Q86U70 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.74■□□□□ 0.27
LDB1Q86U70 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB1Q86U70 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.74■□□□□ 0.27
LDB1Q86U70 AP001005.1-201ENST00000571755 1248 ntBASIC16.74■□□□□ 0.27
LDB1Q86U70 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
LDB1Q86U70 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.74■□□□□ 0.27
LDB1Q86U70 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
LDB1Q86U70 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 AC008741.2-201ENST00000612792 3115 ntBASIC16.74■□□□□ 0.27
LDB1Q86U70 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.74■□□□□ 0.27
LDB1Q86U70 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
LDB1Q86U70 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LDB1Q86U70 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.73■□□□□ 0.27
LDB1Q86U70 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.73■□□□□ 0.27
LDB1Q86U70 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LDB1Q86U70 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
LDB1Q86U70 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
LDB1Q86U70 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.73■□□□□ 0.27
LDB1Q86U70 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
LDB1Q86U70 MRPL20P1-201ENST00000400819 433 ntBASIC16.73■□□□□ 0.27
LDB1Q86U70 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LDB1Q86U70 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LDB1Q86U70 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
LDB1Q86U70 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.73■□□□□ 0.27
LDB1Q86U70 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.73■□□□□ 0.27
LDB1Q86U70 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
LDB1Q86U70 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.73■□□□□ 0.27
LDB1Q86U70 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.73■□□□□ 0.27
LDB1Q86U70 PGM5P2-202ENST00000637225 1043 ntBASIC16.73■□□□□ 0.27
LDB1Q86U70 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LDB1Q86U70 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms