Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 AL603756.1-201ENST00000606511 2163 ntBASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 DNAJB3-201ENST00000446806 729 ntBASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 ACTL9-202ENST00000612068 1252 ntBASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
TTC39BQ5VTQ0 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 PDPK2P-202ENST00000562415 1191 ntBASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 AC018845.2-201ENST00000568326 409 ntBASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 AC091167.2-201ENST00000579581 588 ntBASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.46■□□□□ 0.39
TTC39BQ5VTQ0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
TTC39BQ5VTQ0 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TTC39BQ5VTQ0 TUBB8P12-201ENST00000308911 1335 ntBASIC17.46■□□□□ 0.38
TTC39BQ5VTQ0 TUBB7P-202ENST00000428444 1305 ntBASIC17.46■□□□□ 0.38
TTC39BQ5VTQ0 TUBB8P7-204ENST00000567960 1332 ntBASIC17.46■□□□□ 0.38
TTC39BQ5VTQ0 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 KRT19P2-202ENST00000557173 1012 ntBASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 DUX4L17-201ENST00000557360 1267 ntBASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 MTDHP5-201ENST00000598980 586 ntBASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 AC004877.2-201ENST00000623941 599 ntBASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TTC39BQ5VTQ0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms