Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 GGT3P-204ENST00000453783 1664 ntBASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 AC002310.6-201ENST00000624451 1377 ntBASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 AC010491.1-201ENST00000563101 2797 ntBASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
LINC00242Q5T6M2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 AK4P3-201ENST00000418260 669 ntBASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 VENTXP7-201ENST00000475503 772 ntBASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
LINC00242Q5T6M2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms